genomics

Sorghum Pan-transcriptome

Understanding the complex inner workings of organisms like sorghum and sugarcane is essential for advancements in agriculture, biofuel production, and various other fields. Genomic resources like pan-transcriptomes play a pivotal role in unlocking this knowledge by providing a comprehensive view of gene expression across diverse genotypes.

Sugarcane Genomics and Transcriptomics Resources

Sugarcane is a widely cultivated plant within Poaceae, which fixates CO2 via C4 photosynthesis. Sugarcane is one of the most important crops around the world, as it is the main source for common sugar, bioenergy and other bioproducts.

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

BACKGROUND: The fungal genus Aspergillus is of critical importance to humankind. Species include those with industrial applications, important pathogens of humans, animals and crops, a source of potent carcinogenic contaminants of food, and an …

Draft genome sequencing of the sugarcane hybrid SP80-3280.

Sugarcane commercial cultivar SP80-3280 has been used as a model for genomic analyses in Brazil. Here we present a draft genome sequence employing Illumina TruSeq Synthetic Long reads. The dataset is available from NCBI BioProject with accession …

Green transcription factors: a chlamydomonas overview.

Transcription factors (TFs) control gene expression by interacting with cis-elements in target gene promoters. Transcription regulators (TRs) assist in controlling gene expression through interaction with TFs, chromatin remodeling, or other …

The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic …